Max Planck Institute for Biological Intelligence

Publications of the Institute

Scientific publications of the MPI for Biological Intelligence - starting in the year 2022.

Journal Article (166)

2024

Journal Article

Allard, C. A. H.; Herbert, A. L.; Krueger, S. P.; Liang, Q.; Walsh, B. L.; Rhyne, A. L.; Gourlay, A. N.; Seminara, A.; Baldwin, M. W.; Kingsley, D. M. et al.; Bellono, N. W.: Evolution of novel sensory organs in fish with legs. Current Biology 34 (19), pp. 4349 - 4356.e7 (2024)

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Atluri, N.; Dulko, E.; Jedrusiak, M.; Klos, J.; Osuru, H. P.; Davis, E.; Beenhakker, M.; Kapur, J.; Zuo, Z.; Lunardi, N.: Anatomical substrates of Rapid Eye Movement sleep rebound in a rodent model of post-sevoflurane sleep disruption. Anesthesiology 140 (4), pp. 729 - 741 (2024)

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Aulsebrook, A. E.; Jacques-Hamilton, R.; Kempenaers, B.: Quantifying mating behaviour using accelerometry and machine learning: Challenges and opportunities. Animal Behaviour 207, pp. 55 - 76 (2024)

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Bauer, J.; Lewin, U.; Herbert, E.; Gjorgjieva, J.; Schoonover, C.; Fink, A.; Rose, T.; Bonhoeffer, T.; Hübener, M.: Sensory experience steers representational drift in mouse visual cortex. bioRxiv: the preprint server for biology (2024)

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Belojevic, J.; Mortier, M. S.; Oberweiser, M. M.; Braig, F.; Haug, J. T.; Haug, C.: The history of short-tailed whip scorpions: Changes in body size and flagellum shape in Schizomida. Swiss Journal of Palaeontology 143 (1), 24 (2024)

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Borst, A.: Connectivity matrix seriation via relaxation. PLoS Computational Biology 20 (2), e1011904 (2024)

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Botero‐Delgadillo, E.; Meza-Angulo, E.; Bayly, N. J.: Abundance models of endemic birds of the Sierra Nevada de Santa Marta, northern South America, suggest small population sizes and dependence on montane elevations. Ornithological Applications 126 (2), duae002 (2024)

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Bulla, M.; Küpper, C.; Lank, D. B.; Albrechtová, J.; Loveland, J. L.; Martin, K.; Teltscher, K. L.; Cragnolini, M.; Lierz, M.; Albrecht, T. et al.; Forstmeier, W.; Kempenaers, B.: Differences in sperm swimming speed and morphology between the three genetic morphs in the ruff sandpiper. bioRxiv: the preprint server for biology (2024)

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Casagrande, S.; Dell'Omo, G.: Mitochondrial bioenergetics and proteomic insights in seabird nestling growth: Linking warmer nest temperatures to reduced body size. SSRN (2024)

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Castelfranco, A.; Alcami, P.: Mitochondria induce anisotropy and delays in action potential conduction. bioRxiv: the preprint server for biology (2024)

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Chun, S. H.; Diaz Almeida, D. S.; Todorov, M. I.; Straub, T.; Ruff, T.; Shao, W.; Yang, J.; Seyit-Bremer, G.; Shen, Y.-J.; Ertürk, A. et al.; del Toro, D.; Shi, S.; Klein, R.: Cortex folding by combined progenitor expansion and adhesion-controlled neuronal migration. bioRxiv: the preprint server for biology (2024)

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Cimiotti, D. V.; Eberhart-Hertel, L. J.; Audevard, A.; Garcias Salas, P. J.; Gelinaud, G.; Günther, K.; Rocha, A.; Schulz, R.; van der Winden, J.; Schmaljohann, H. et al.; Küpper, C.: Dispersal in Kentish plovers (Charadrius alexandrinus): Adult females perform furthest movements. Journal of Ornithology 165 (2), pp. 301 - 314 (2024)

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de Framond, L.; Müller, R.; Feuerriegel, L.; Brumm, H.: Do the rain calls of Chaffinches indicate rain? Journal of Ornithology 165 (3), pp. 615 - 625 (2024)

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Del-Valle-Anton, L.; Amin, S.; Cimino, D.; Neuhaus, F.; Dvoretskova, E.; Fernández, V.; Babal, Y. K.; Garcia-Frigola, C.; Prieto-Colomina, A.; Murcia-Ramón, R. et al.; Nomura, Y.; Cárdenas, A.; Feng, C.; Moreno-Bravo, J. A.; Götz, M.; Mayer, C.; Borrell, V.: Multiple parallel cell lineages in the developing mammalian cerebral cortex. Science Advances 10 (13), eadn9998 (2024)

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Delhey, K.; Krietsch, J.; Parisi, A.; Valcu, M.; Kempenaers, B.: Variation in nuptial color in relation to sex, individual quality and mating success in the sex-role reversed Phalaropus fulicarius (Red Phalarope). Ornithology 141 (3), ukae016 (2024)

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Ding, W.; Weltzien, H.; Peters, C.; Klein, R.: Nausea-induced suppression of feeding is mediated by central amygdala Dlk1-expressing neurons. Cell Reports 43 (4), 113990 (2024)

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Dvoretskova, E.; Ho, M. C.; Kittke, V.; Neuhaus, F.; Vitali, I.; Lam, D. D.; Delgado, I.; Feng, C.; Torres, M.; Winkelmann, J. et al.; Mayer, C.: Spatial enhancer activation influences inhibitory neuron identity during mouse embryonic development. Nature Neuroscience 27 (5), pp. 862 - 872 (2024)

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Eberhart-Hertel, L. J.; Safari, I.; Makomba, P.; Hertel, A.; Goymann, W.: Early-life demographic processes do not drive adult sex ratio biases and mating systems in sympatric coucal species. Functional Ecology 38 (8), pp. 1779 - 1795 (2024)

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Edelman, B. J.; Siegenthaler, D.; Wanken, P. G.; Jenkins, B. J.; Schmid, B.; Ressle, A.; Gogolla, N.; Frank, T.; Macé, E.: The COMBO window: A chronic cranial implant for multiscale circuit interrogation in mice. PLoS Biology 22 (6), e3002664 (2024)

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Edwards, S. V.; Cloutier, A.; Cockburn, G.; Driver, R.; Grayson, P.; Katoh, K.; Baldwin, M. W.; Sackton, T. B.; Baker, A. J.: A nuclear genome assembly of an extinct flightless bird, the little bush moa. Science Advances 10 (21), eadj6823 (2024)

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Fermani, F.; Chang, S.; Peters, C.; Gaitanos, L.; Alcala Morales, P. L.; Ramakrishnan, C.; Deisseroth, K.; Klein, R.: Food and water uptake are regulated by distinct central amygdala circuits revealed using intersectional genetics. bioRxiv: the preprint server for biology (2024)

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Fernholz, M. H. P.; Guggiana Nilo, D.; Bonhoeffer, T.; Kist, A. M.: DeepD3, an open framework for automated quantification of dendritic spines. PLoS Computational Biology 20 (2), e1011774 (2024)

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Freitas, B.; D'Amelio, P. B.; Milá, B.; Thébaud, C.; Janicke, T.: Meta-analysis of the acoustic adaptation hypothesis reveals no support for the effect of vegetation structure on acoustic signalling across terrestrial vertebrates. bioRxiv: the preprint server for biology (2024)

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Giraldo Deck, L. M.; Loveland, J. L.; Goymann, W.; Lank, D. B.; Küpper, C.: A supergene affects androgen concentrations during early development in a bird with alternative reproductive morphs. Hormones and Behavior 166, 105645 (2024)

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Goltstein, P.; Laubender, D.; Bonhoeffer, T.; Hübener, M.: Ocular dominance columns in mouse visual cortex. bioRxiv: the preprint server for biology (2024)

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Gould, E.; Fraser, H. S.; Parker, T. H.; Nakagawa, S.; Griffith, S. C.; Vesk, P. A.; Fidler, F.; Hamilton, D. G.; Abbey-Lee, R. N.; Abbott, J. K. et al.; Aguirre, L. A.; Alcaraz, C.; Aloni, I.; Altschul, D.; Arekar, K.; Atkins, J. W.; Atkinson, J.; Baker, C.; Barrett, M.; Bell, K.; Bello, S. K.; Beltrán, I.; Berauer, B. J.; Bertram, M. G.; Billman, P. D.; Blake, C. K.; Blake, S.; Bliard, L.; Bonisoli-Alquati, A.; Bonnet, T.; Bordes, C. N. M.; Bose, A. P. H.; Botterill-James, T.; Boyd, M. A.; Boyle, S. A.; Bradfer-Lawrence, T.; Bradham, J.; Brand, J. A.; Brengdahl, M. I.; Bulla, M.; Bussière, L.; Camerlenghi, E.; Campbell, S. E.; Campos, L. L. F.; Caravaggi, A.; Cardoso, P.; Carroll, C. J. W.; Catanach, T. A.; Chen, X.; Chik, H. Y. J.; Choy, E. S.; Christie, A. P.; Chuang, A.; Chunco, A. J.; Clark, B. L.; Contina, A.; Covernton, G. A.; Cox, M. P.; Cressman, K. A.; Crotti, M.; Crouch, C. D.; D'Amelio, P. B.; de Sousa, A. A.; Döbert, T. F.; Dobler, R.; Dobson, A. J.; Doherty, T. S.; Drobniak, S. M.; Duffy, A. G.; Duncan, A. B.; Dunn, R. P.; Dunning, J.; Dutta, T.; Eberhart-Hertel, L. J.; Elmore, J. A.; Elsherif, M. M.; English, H. M.; Ensminger, D. C.; Ernst, U. R.; Ferguson, S. M.; Fernández-Juricic, E.; Ferreira-Arruda, T.; Fieberg, J.; Finch, E. A.; Fiorenza, E. A.; Fisher, D. N.; Fontaine, A.; Forstmeier, W.; Fourcade, Y.; Frank, G. S.; Freund, C. A.; Fuentes-Lillo, E.; Gandy, S. L.; Gannon, D. G.; García-Cervigón, A. I.; Garretson, A. C.; Ge, X.; Geary, W. L.; Géron, C.; Gilles, M.; Girndt, A.; Gliksman, D.; Goldspiel, H. B.; Gomes, D. G. E.; Good, M. K.; Goslee, S. C.; Gosnell, J. S.; Grames, E. M.; Gratton, P.; Grebe, N. M.; Greenler, S. M.; Griffioen, M.; Griffith, D. M.; Griffith, F. J.; Grossman, J. J.; Güncan, A.; Haesen, S.; Hagan, J. G.; Hager, H. A.; Harris, J. P.; Harrison, N. D.; Hasnain, S. S.; Havird, J. C.; Heaton, A. J.; Herrera-Chaustre, M. L.; Howard, T. J.; Hsu, B.-Y.; Iannarilli, F.; Iranzo, E. C.; Iverson, E. N. K.; Jimoh, S. O.; Johnson, D. H.; Johnsson, M.; Jorna, J.; Jucker, T.; Jung, M.; Kačergytė, I.; Kaltz, O.; Ke, A.; Kelly, C. D.; Keogan, K.; Keppeler, F. W.; Killion, A. K.; Kim, D.; Kochan, D. P.; Korsten, P.; Kothari, S.; Kuppler, J.; Kusch, J. M.; Lagisz, M.; Lalla, K. M.; Larkin, D. J.; Larson, C. L.; Lauck, K. S.; Lauterbur, M. E.; Law, A.; Léandri-Breton, D.-J.; Lembrechts, J. J.; L'Herpiniere, K.; Lievens, E. J. P.; de Lima, D. O.; Lindsay, S.; Luquet, M.; MacLeod, R.; Macphie, K. H.; Magellan, K.; Mair, M. M.; Malm, L. E.; Mammola, S.; Mandeville, C. P.; Manhart, M.; Manrique-Garzon, L. M.; Mäntylä, E.; Marchand, P.; Marshall, B. M.; Martin, C. A.; Martin, D. A.; Martin, J. M.; Martinig, A. R.; McCallum, E. S.; McCauley, M.; McNew, S. M.; Meiners, S. J.; Merkling, T.; Michelangeli, M.; Moiron, M.; Moreira, B.; Mortensen, J.; Mos, B.; Muraina, T. O.; Murphy, P. W.; Nelli, L.; Niemelä, P.; Nightingale, J.; Nilsonne, G.; Nolazco, S.; Nooten, S. S.; Novotny, J. L.; Olin, A. B.; Organ, C. L.; Ostevik, K. L.; Palacio, F. X.; Paquet, M.; Parker, D. J.; Pascall, D. J.; Pasquarella, V. J.; Paterson, J. H.; Payo-Payo, A.; Pedersen, K. M.; Perez, G.; Perry, K. I.; Pottier, P.; Proulx, M. J.; Proulx, R.; Pruett, J. L.; Ramananjato, V.; Randimbiarison, F. T.; Razafindratsima, O. H.; Rennison, D. J.; Riva, F.; Riyahi, S.; Roast, M. J.; Rocha, F. P.; Roche, D. G.; Román-Palacios, C.; Rosenberg, M. S.; Ross, J.; Rowland, F. E.; Rugemalila, D.; Russell, A. L.; Ruuskanen, S.; Saccone, P.; Sadeh, A.; Salazar, S. M.; Sales, K.; Salmón, P.; Sánchez-Tójar, A.; Santos, L. P.; Santostefano, F.; Schilling, H. T.; Schmidt, M.; Schmoll, T.; Schneider, A. C.; Schrock, A. E.; Schroeder, J.; Schtickzelle, N.; Schultz, N. L.; Scott, D. A.; Scroggie, M. P.; Shapiro, J. T.; Sharma, N.; Shearer, C. L.; Simón, D.; Sitvarin, M. I.; Skupien, F. L.; Slinn, H. L.; Smith, G. P.; Smith, J. A.; Sollmann, R.; Whitney, K. S.; Still, S. M.; Stuber, E. F.; Sutton, G. F.; Swallow, B.; Taff, C. C.; Takola, E.; Tanentzap, A. J.; Tarjuelo, R.; Telford, R. J.; Thawley, C. J.; Thierry, H.; Thomson, J.; Tidau, S.; Tompkins, E. M.; Tortorelli, C. M.; Trlica, A.; Turnell, B. R.; Urban, L.; de Vondel, S. V.; van der Wal, J. E. M.; Eeckhoven, J. V.; van Oordt, F.; Vanderwel, K. M.; Vanderwel, M. C.; Vanderwolf, K. J.; Vélez, J.; Vergara-Florez, D. C.; Verrelli, B. C.; Vieira, M. V.; Villamil, N.; Vitali, V.; Vollering, J.; Walker, J.; Walker, X. J.; Walter, J. A.; Waryszak, P.; Weaver, R. J.; Wedegärtner, R. E. M.; Weller, D. L.; Whelan, S.; White, R. L.; Wolfson, D. W.; Wood, A.; Yanco, S. W.; Yen, J. D. L.; Youngflesh, C.; Zilio, G.; Zimmer, C.; Zimmerman, G. M.; Zitomer, R. A.: Same data, different analysts: Variation in effect sizes due to analytical decisions in ecology and evolutionary biology. EcoEvoRxiv (2024)

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Goymann, W.: Of hormones (well, not really!), behavior, and observer bias. Ethology 130 (6), e13450 (2024)

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Goymann, W.; Brumm, H.; Kappeler, P. M.: Geschlecht und Gender: Eine biologische Perspektive. Biologie in unserer Zeit 54 (4) (2024)

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Goymann, W.; Korschefsky, T.; Küblbeck, M.: Zeit zum Handeln: Alarmierender Rückgang, Gefährdungsursachen und Empfehlungen zum Erhalt des Braunkehlchens in Oberbayern. Anliegen Natur: Zeitschrift für Naturschutz und angewandte Landschaftsökologie 46 (2), pp. 81 - 88 (2024)

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Hees, J. T.; Segura, I.; Schneider, A.; Schifferer, M.; Misgeld, T.; Harbauer, A.: ER-associated biogenesis of PINK1 preprotein for neuronal mitophagy. bioRxiv: the preprint server for biology (2024)

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Hees, J. T.; Wanderoy, S.; Lindner, J.; Helms, M.; Murali Mahadevan, H.; Harbauer, A.: Insulin signalling regulates Pink1 mRNA localization via modulation of AMPK activity to support PINK1 function in neurons. Nature Metabolism 6 (3), pp. 514 - 530 (2024)

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Heim, F.; Mendoza, E.; Koparkar, A.; Vallentin, D.: Disinhibition enables vocal repertoire expansion after a critical period. Nature Communications 15, 7565 (2024)

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Hellevik, A. M.; Mardoum, P.; Hahn, J.; Koelsch, Y.; D’Orazi, F. D.; Suzuki, S. C.; Godinho, L.; Lawrence, O.; Rieke, F.; Shekhar, K. et al.; Sanes, J. R.; Baier, H.; Baden, T.; Wong, R. O.; Yoshimatsu, T.: Ancient origin of the rod bipolar cell pathway in the vertebrate retina. Nature Ecology & Evolution 8 (6), pp. 1165 - 1179 (2024)

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Hillebrecht, T.; Korbel, R.; Rinder, M.; Gahr, M.: Circadian corticosterone profile in laying hens (Gallus gallus domesticus). Animals 14 (6), 873 (2024)

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Hoffmann, S.: Shared leadership beneath the waves. Nature Ecology & Evolution (2024)

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Huppertz, M.-C.; Wilhelm, J.; Grenier, V.; Schneider, M.; Falt, T.; Porzberg, N.; Hausmann, D.; Hoffmann, D. C.; Hai, L.; Tarnawski, M. et al.; Pino, G.; Slanchev, K.; Kolb, I.; Acuna, C.; Fenk, L. M.; Baier, H.; Hiblot, J.; Johnsson, K.: Recording physiological history of cells with chemical labeling. Science 383 (6685), pp. 890 - 897 (2024)

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Iturralde Polit, P.; Araya-Salas, M.; Goerlitz, H. R.; Chaverri, G.: Variation in echolocation call emission of Neotropical insect-eating bats in response to shifting ambient temperatures. bioRxiv: the preprint server for biology (2024)

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Jendryka, M. M.; Lewin, U.; Kapanaiah, S. K. T.; Dermutz, H.; Liss, B.; Pekcec, A.; Akam, T.; Grewe, B. F.; Kätzel, D.: Excitatory neurons of the anterior cingulate cortex encode chosen actions and their outcomes rather than cognitive state. bioRxiv: the preprint server for biology (2024)

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Ko, M.-C.; Frankl-Vilches, C.; Bakker, A.; Sohnius-Wilhelmi, N.; Alcami, P.; Gahr, M.: From silence to song: Testosterone triggers extensive transcriptional changes in the female canary HVC. bioRxiv: the preprint server for biology (2024)

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Kotlyarenko, Y.; Bright, A. R.; Neuhaus, F.; Rodrigues, D.; Vitali, I.; Myoga, M.; Mayer, C.: Nfib regulates progenitor competence in maturation of GABAergic neurons. bioRxiv: the preprint server for biology (2024)

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Kouhi, H.; Ghalami, M.; Norouzzadeh, A.; Ahmadi, A.: Transfer function-based road classification for vehicles with nonlinear semi-active suspension. World Electric Vehicle Journal 15 (4), 143 (2024)

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Krentz, M.; Tutunji, R.; Kogias, N.; Murali Mahadevan, H.; Reppmann, Z. C.; Krause, F.; Hermans, E. J.: A comparison of fMRI data-derived and physiological data-derived methods for physiological noise correction. bioRxiv: the preprint server for biology (2024)

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Krietsch, J.; Valcu, M.; Cragnolini, M.; Forstmeier, W.; Kempenaers, B.: Mutual mate guarding with limited sexual conflict in a sex-role-reversed shorebird. Behavioral Ecology 35 (1), arad084 (2024)

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Leitao, A.; Gahr, M.: Babbling opens the sensory phase for imitative vocal learning. Proceedings of the National Academy of Sciences of the United States of America 121 (18), e2312323121 (2024)

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Lim, H.; Zhang, Y.; Peters, C.; Straub, T.; Mayer, J. L.; Klein, R.: Genetically- and spatially-defined basolateral amygdala neurons control food consumption and social interaction. Nature Communications 15, 6868 (2024)

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Linscott, J. A.; Basso, E.; Bathrick, R.; Bosi de Almeida, J.; Anderson, A. M.; Angulo-Pratolongo, F.; Ballard, B. M.; Bêty, J.; Brown, S. C.; Christie, K. S. et al.; Clements, S. J.; Friis, C.; Gesmundo, C.; Giroux, M.-A.; Harrison, A.-L.; Harwood, C. M.; Hill, J. M.; Johnson, J. A.; Kempenaers, B.; Laliberté, B.; Lamarre, J.-F.; Lanctot, R. B.; Latty, C.; Lecomte, N.; McDuffie, L. A.; Navedo, J. G.; Nol, E.; Pohlen, Z. M.; Rausch, J.; Renfrew, R. B.; Ruiz, J.; Russell, M.; Ruthrauff, D. R.; Saalfeld, S. T.; Sandercock, B. K.; Schulte, S. A.; Smith, P. A.; Taylor, A. R.; Tibbitts, T. L.; Valcu, M.; Weegman, M. D.; Wright, J. R.; Senner, N. R.: The Amazon Basin’s rivers and lakes support Nearctic-breeding shorebirds during southward migration. Ornithological Applications, duae034 (2024)

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Low, G. W.; Pavlova, A.; Gan, H. M.; Ko, M.-C.; Sadanandan, K. R.; Lee, Y. P.; Amos, J. N.; Austin, L.; Falk, S.; Dowling, D. K. et al.; Sunnucks, P.: Accelerated differentiation of neo-W nuclear-encoded mitochondrial genes between two climate-associated bird lineages signals potential co-evolution with mitogenomes. Heredity (2024)

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Madariaga, D.; Arro, D.; Irarrázaval, C.; Soto, A.; Guerra, F.; Romero, A.; Ovalle, F.; Fedrigolli, E.; Des Rosiers, T.; Serbe-Kamp, E. et al.; Marzullo, T.: A library of electrophysiological responses in plants - A model of transversal education and open science. Plant Signaling & Behavior 19 (1), 2310977 (2024)

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Mauker, P.; Beckmann, D.; Kitowski, A.; Heise, C.; Wientjens, C.; Davidson, A. J.; Wanderoy, S.; Fabre, G.; Harbauer, A.; Wood, W. et al.; Wilhelm, C.; Thorn-Seshold, J.; Misgeld, T.; Kerschensteiner, M.; Thorn-Seshold, O.: Fluorogenic chemical probes for wash-free imaging of cell membrane damage in ferroptosis, necrosis, and axon injury. Journal of the American Chemical Society 146 (16), pp. 11072 - 11082 (2024)

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Mazengenya, P.; Lesku, J. A.; Rattenborg, N. C.; Manger, P. R.: Apparent absence of hypothalamic cholinergic neurons in the common ostrich and emu: Implications for global brain states during sleep. The Journal of Comparative Neurology 532 (2), e25587 (2024)

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